Biophysical Society 60th Annual Meeting

2781-Pos Board B158 PREDICTING THE MECHANISM AND KINETICS OF THE WATSON-CRICK TO HOOGSTEEN BASE PAIRING TRANSITION.  Jocelyne Vreede , Peter G. Bolhuis, David WH Swenson 2782-Pos Board B159 BIOPHYSICAL MECHANISM OF SEQUENCE-DEPENDENT ATTRACTION BETWEEN DOUBLE-STRANDED DNAS AND ITS BIOLOGICAL SIGNIFI- CANCE. Hajin Kim 2783-Pos Board B160 G-QUADRUPLEXES RECOGNITION BY PLATINUM COMPLEXES PROBED BY SITE-DIRECTED SPIN LABELING. Xiaojun Zhang, Cuixia Xu, Zong-Wan Mao, Board B161 COMPUTATIONAL INVESTIGATION OF THE DISSOCIATIVE RECOMBINA- TION OF ADENINE, GUANINE, THYMINE, AND CYTOSINE. Zachary P. Chen , Hwoi Chan Kwon, Yoon Seo Lee, Charles P. De Guzman, Vola M. Andrianarijaona 2785-Pos Board B162 ELUCIDATING THE ROLE OF ELECTROSTATICS IN CONDENSED DNA AR- RAYS. Sarah Hansen , Wei Meng, Abby Bull, Xiangyun Qiu, Kurt Andresen 2786-Pos Board B163 DESIGN AND CONSTRUCT A TYPE OF FLUORESCENTLY LABELED CIRCULAR DNA MOLECULES TO STUDY DNA TOPOLOGY AND TOPOISOMERASES BY FLUORESCENCE RESONANCE ENERGY TRANSFER (FRET). Maria De Cabrera , Maxwell Gu, Fenfei Leng 2787-Pos Board B164 THE EFFECT OF LOCAL MELTING OF DNA ON DNA LOOP FORMATION.  Jiyoun Jeong , Harold D. Kim 2788-Pos Board B165 A SURVEY OF THE IONIZATION ENERGIES OF THE DNA NITROGENOUS BASES VIA DFT-BASED CALCULATIONS OF THEIR POTENTIAL ENERGY SURFACES. Hwoi Chan Kwon , Zachary P. Chen, Aaron Z. Watson, Vola M. Andrianarijaona 2789-Pos Board B166 THE ROLE OF INTER-NUCLEOBASE COULOMBIC DECAY IN THE PHOTO- IONIZATION OF DNA. Abraham C. Duot , Justin Lyu, David Rivas, Michael Andrianarijaona 2790-Pos Board B167 DYNAMICS OF LARGE DNA LOOPS. Zubair Azad , Robert Riehn 2791-Pos Board B168 SYSTEMATIC AND QUANTITATIVE ANALYSIS OF G-QUADRUPLEX DNA FOLDING. Chun-Ying Lee , Alex Kreig, Sua Myong 2792-Pos Board B169 STRUCTURE-BASED DESIGN, SYNTHESIS, AND CHARACTERIZATION OF CUSTOM DNA NANOPARTICLES. Sakul Ratanalert , Remi Veneziano, Kaiming Zhang, Keyao Pan, Fei Zhang, Wah Chiu, Hao Yan, Mark Bathe 2793-Pos Board B170 STAPLE-FREE DNA SELF-ASSEMBLY. Sakul Ratanalert , Mark Bathe 2794-Pos Board B171 NUCLEIC ACID-PEPTIDE COMPLEXES CONTROLLED BY DNA HYBRIDIZA- TION.  Jeffrey Vieregg , Michael Lueckheide, Lorraine Leon, Amanda Marciel, Matthew Tirrell 2795-Pos Board B172 THE ROLE OF ENTROPY IN EXPLAINING TIGHTLY BEND DNA PROPENSITY AND KINETIC BARRIERS TO BASE PAIR UNZIPPING.  Ioan Andricioaei Peter Qin 2784-Pos

2796-Pos Board B173 DESIGNING AN ELECTROCHEMICALLY LABELLED THROMBIN DNA AP- TAMER USING MOLECULAR DYNAMICS SIMULATIONS. Loan K. Huynh ,

Alan Chen 2797-Pos

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Board B174 DYNAMIC CONTROL OF DNA ORIGAMI NANOSTRUCTURES VIA GOLD NANOPARTICLES.  Joshua A. Johnson , Abhilasha Dehankar, Qirui Fan, Jessica Winter, Carlos Castro 2798-Pos Board B175 COMPUTATIONAL AND EXPERIMENTAL CHARACTERIZATION OF RIBO- SOMAL DNA AND RNA G-QUADRUPLEXES. Samuel S. Cho Membrane Dynamics (Boards B176 - B204) 2799-Pos Board B176 FLIP-FLOP PROMOTION BY MEMBRANE-SPANNING SEQUENCES IN THE ER MEMBRANE PROTEINS. Hiroyuki Nakao , Keisuke Ikeda, Yasushi Ishihama, Minoru Nakano 2800-Pos Board B177 MOLECULAR DYNAMICS SIMULATIONS OF INTER-LEAFLET DEPENDENCE IN ASYMMETRIC LIPID MEMBRANES. Michael D. Weiner , Gerald W. Board B178 CONTROLLING MEMBRANE DYNAMICS BY TUNING THE HYDROPHOBIC MISMATCH AND LIPID COMPOSTION. Butler D. Paul , Elizabeth Kelley, Rana Ashkar, Robert Bradbury, Andrea Woodka, Michihiro Nagao 2802-Pos Board B179 STOCHASTIC BUT FINE-TUNED: DUALISM IN CELL MEMBRANES’ ORGANI- ZATION AS REVEALED BY COMPUTER SIMULATIONS. Roman G. Efremov 2803-Pos Board B180 PRE-TRANSITION EFFECTS MEDIATE FORCES OF ASSEMBLY BETWEEN TRANSMEMBRANE PROTEINS: THE ORDERPHOBIC EFFECT. Shachi Katira , Kranthi K. Mandadapu, Suriyanarayanan Vaikuntanathan, Berend Smit, David Chandler 2804-Pos Board B181 MEMBRANE CROWDING AND ANOMALOUS DIFFUSION IN ARTIFICIAL LIPID BILAYERS. Helena L.E. Coker , Matthew R. Cheetham, Ravinash Krishna Kumar, Mark I. Wallace 2805-Pos Board B182 FAST MEMBRANE DYNAMICS IN PLANAR SUSPENDED LIPID BILAYERS RE- VEALED BY SINGLE PARTICLE TRACKING. Xinxin Woodward , Abir Kabbani, Christopher V. Kelly 2806-Pos Board B183 INVESTIGATING MEMBRANE DOMAIN DYNAMICS USING MULTIMODAL OPTICAL MICROSCOPY. Tyler Floden, Rochelle Warner, Ahmed A. Heikal, Erin D. Sheets 2807-Pos Board B184 FASTER, MORE ACCURATE QUANTIFICATION OF DIFFUSION AND CORRE- LATED MOTIONS IN LIPID BILAYERS. Tara M. Urner , Gwendolyn A. Claflin, Michael G. Lerner, Rodoula Kyvelou-Kokkaliaris 2808-Pos Board B185 SINGLE PARTICLE TRACKING IN DOUBLE CUSHIONED, BLEBBED SUPPORT- ED LIPID BILAYERS ENABLES STUDIES OF TRANSMEMBRANE PROTEIN DIF- FUSION. Rohit R. Singh , Martin I. Malgapo, Maurine Linder, Susan Daniel 2809-Pos Board B186 NANO-SUBSTRUCTURES OF RAFT-MIMETIC LIQUID-ORDERED MEM- BRANE DOMAINS REVEALED BY HIGH-SPEED SINGLE-PARTICLE TRACK- ING. Hsiao-Mei Wu, Ying-Hsiu Lin, Tzu-Chi Yen, Chia-Lung Hsieh Feigenson 2801-Pos

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